Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815130.1_cds_XP_016498183.1_12239
CDS Infomation

[gene=LOC107816949] [db_xref=GeneID:107816949] [protein=U-box domain-containing protein 4-like isoform X1] [protein_id=XP_016498183.1] [location=complement(join(20707..20750,21026..21077,21286..22269))] [gbkey=CDS]
Sequence

ATGGAAACGGAGGTTCATCAACCAAATTTCACCTACCTGGGACGAACATTTAGCGGTCTC
AATATTACTGAATCCTCCTCAGCTTTCAGTGACTGCAACAGCGATAGATCCGGCGAGTTC
CCGACGGCGTCTTCTCAAAGCCGGCGACTATTAATAGCATGCGCGTCGGAGAACTCAGAT
GAATTAATCCAGCAACTCGTCTCTGATCTCGAGTCAAACTCAATCGACGTGCAAAAGCAA
GCGGCAATGGAGCTTAGACTCTTAGCGAAGAACAAATCGGAAAATCGTCTCAAAATCGCT
CGAGCTGGAGCGATTAAGCCTTTGATTTCTCTTATCTCTTCCACTGATCTTCACCTTCAA
GAGTACGGCGTTACCGCGATTCTCAATTTATCTCTCTGTGATGAAAATAAGGAGCTCATC
GCAGCATCAGGAGCGATCAAACCGTTAGTTCGAGCTCTGAAAATCGGCAATTCAACCGCG
AAGGAGAATTCCGCTTGCGCTCTGCTCCGTTTGTCGCAAATCGAAGAGAACAAAATCGCA
ATCGGACGGTCGGGTGCAATACCCCCGTTAGTGAACCTTCTAGAAGCCGGCAATTTCCGC
GGGAAGAAGGACGCCTCAACTGCACTGTACTCCTTATGCTCCGTGAAGGAGAACAAGGTC
AGAGCGGTACAAGCTGGAGTAATGAAGCCGTTAGTGGAATCAATGGCGGATTTCAGTTCA
AACATGGTGGATAAATCGGCGTTCGTGGTGAGCGTTTTGATATCGTTGACAGAGGCGAGG
GCGGCTGTGGTGGAGGAAGGTGGAATTCCGGTGTTGGTGGAGATCGTGGAGGTGGGGACA
CATCGACAGAAGGAGATTGCGGTGGCGATATTGTTGCAGCTGTGTGAGGATAGCGTGACT
TACCGTACTATGGTGGCACGCGAAGGCGCTATTCCCCCATTGGTTGCTTTGTCCCAATCT
GGTACAAGTCGCGCCAAACAAAAGGTGGATGCACTAGTCGTTCTCCAATATGTCTGCCTC
CTGTGGCCTCTAGCAGGCGGAGACACTGATTGCGCTTCTACGACAGCCAAGATCCGGTAA

Peptide Sequence

PEP ID

XP_016498183.1
PEP Infomation

PREDICTED: U-box domain-containing protein 4-like isoform X1 [Nicotiana tabacum]
Sequence

METEVHQPNFTYLGRTFSGLNITESSSAFSDCNSDRSGEFPTASSQSRRLLIACASENSD
ELIQQLVSDLESNSIDVQKQAAMELRLLAKNKSENRLKIARAGAIKPLISLISSTDLHLQ
EYGVTAILNLSLCDENKELIAASGAIKPLVRALKIGNSTAKENSACALLRLSQIEENKIA
IGRSGAIPPLVNLLEAGNFRGKKDASTALYSLCSVKENKVRAVQAGVMKPLVESMADFSS
NMVDKSAFVVSVLISLTEARAAVVEEGGIPVLVEIVEVGTHRQKEIAVAILLQLCEDSVT
YRTMVAREGAIPPLVALSQSGTSRAKQKVDALVVLQYVCLLWPLAGGDTDCASTTAKIR

Transcript Sequence

Gene sequence data has not been registered.